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Institut de Biologie StructuraleGrenoble / France

2008

Adam E, Sarrazin S, Landolfi C, Motte V, Lortat-Jacob H, Lassalle P and Delehedde M
Efficient long-term and high-yielded production of a recombinant proteoglycan in eukaryotic HEK293 cells using a membrane-based bioreactor.
Biochemical and Biophysical Research Communications (2008) 369(2) : 297-302

Adam V, Lelimousin M, Boehme S, Desfonds G, Nienhaus K, Field MJ, Wiedenmann J, McSweeney S, Nienhaus GU and Bourgeois D
Structural characterization of IrisFP, an optical highlighter undergoing multiple photo-induced transformations.
Proceeding of the National Academy of Sciences U S A (2008) 105(47) : 18343-8

Angulo J, Diaz I, Reina JJ, Tabarani G, Fieschi F, Rojo J and Nieto PM
Saturation transfer difference (STD) NMR spectroscopy characterization of dual binding mode of a mannose disaccharide to DC-SIGN.
Chembiochem (2008) 9(14) : 2225-7

Arlaud GJ (2008)
Structure and function of the C1 complex : a historical perspective In Molecular Aspects of Innate and Adaptive Immunity, édité par K. B. M. Reid and R. B. Sim, RSC Publishing, pp 49-64

Armstrong FA and Fontecilla-Camps JC
Biochemistry. A natural choice for activating hydrogen.
Science (2008) 321(5888) : 498-9

Attali C, Durmort C, Vernet T and Di Guilmi AM
The interaction of Streptococcus pneumoniae with plasmin mediates transmigration across endothelial and epithelial monolayers by intercellular junctions cleavage.
_ Infection and Immunity (2008) 76(11) : 5350-5356

Attali C, Frolet C, Durmort C, Offant J, Vernet T and Di Guilmi AM
Streptococcus pneumoniae choline-binding protein E interaction with plasminogen/plasmin stimulates migration across the extracellular matrix.
Infection and Immunity (2008) 76(2) : 466-476

Avoscan L, Khodja H, Carrière M, Covès J and Gouget B
Pixe analyses of the soluble and membrane se-containing proteins extracted from Cupriavidus metallidurans ch34 after selenium oxides challenge.
International Journal of PIXE (2008) 18(3-4) : 91-99

Bally I, Rossi V, Thielens N, Gaboriaud C and Arlaud G
Identification of the C1q binding sites of C1r and C1s : A refined 3D model of the C1 complex.
Molecular Immunology (2008) 45(16) : 4097-4097

Bauvois C, Jacquamet L, Huston AL, Borel F, Feller G and Ferrer JL
Crystal structure of the cold-active aminopeptidase from Colwellia psychrerythraea, a close structural homologue of the human bifunctional leukotriene A4 hydrolase.
Journal of Biological Chemistry (2008) 283(34) : 23315-23325

Bersch B, Favier A, Schanda P, van Aelst S, Vallaeys T, Coves J, Mergeay M and Wattiez R
Molecular structure and metal-binding properties of the periplasmic CopK protein expressed in Cupriavidus metallidurans CH34 during copper challenge.
Journal of Molecular Biology (2008) 380(2) : 386-403

Bibert S, Ayari H, Riveline D, Concord E, Hermant B, Vernet T and Gulino-Debrac D
Establishment of cell-cell junctions depends on the oligomeric states of VE-cadherin.
Journal of Biochemistry (2008) 143(6) : 821-832

Biro A and Arlaud GJ
C1q recognizes the lipid component of enzymatically modified low-density lipoprotein.
Molecular Immunology (2008) 45(16) : 4140-4140

Bourgeois D
The structural dynamics of myoglobin investigated by sub-nanosecond crystallography.
Actualité Chimique (2008) 317 : 55-59

Bouvignies G, Markwick PR and Blackledge M
Characterization of protein dynamics from residual dipolar couplings using the three dimensional Gaussian axial fluctuation model. restaurants.
Proteins (2008) 71(1) : 353-63

Brunori M, Bourgeois D and Vallone B
Structural dynamics of myoglobin.
Methods in Enzymology (2008) 437 : 397-416

Carletti E, Li H, Li B, Ekstrom F, Nicolet Y, Loiodice M, Gillon E, Froment MT, Lockridge O, Schopfer LM, Masson P and Nachon F
Aging of cholinesterases phosphylated by tabun proceeds through o-dealkylation.
Journal of the American Chemical Society (2008) 130(47) : 16011-16020

Cavazza C, Martin L, Mondy S, Gaillard J, Ratet P and Fontecilla-Camps JC
The possible role of an [FeFe]-hydrogenase-like protein in the plant responses to changing atmospheric oxygen levels.
Journal of Inorganic Biochemistry (2008) 102(5-6) : 1359-1365

Chamieh H, Guetta D and Franzetti B
The two PAN ATPases from Halobacterium display N-terminal heterogeneity and form labile complexes with the 20S proteasome.
Biochemical Journal (2008) 411(2) : 387-97

Cherrier MV, Cavazza C, Bochot C, Lemaire D and Fontecilla-Camps JC
Structural characterization of a putative endogenous metal chelator in the periplasmic nickel transporter NikA.
Biochemistry (2008) 47(38) : 9937-43

Clapier CR, Chakravarthy S, Petosa C, Fernandez-Tornero C, Luger K and Muller CW
Structure of the Drosophila nucleosome core particle highlights evolutionary constraints on the H2A-H2B histone dimer.
Proteins (2008) 71(1) : 1-7

Colletier JP, Bourgeois D, Sanson B, Fournier D, Sussman JL, Silman I and Weik M
Shoot-and-Trap : use of specific x-ray damage to study structural protein dynamics by temperature-controlled cryo-crystallography.
Proceedings of the National Academy of Sciences U S A (2008) 105(33) : 11742-7

Crublet E, Andrieu JP, Vives RR and Lortat-Jacob H
The HIV-1 envelope glycoprotein gp120 features four heparan sulfate binding domains, including the co-receptor binding site.
Journal of Biological Chemistry (2008) 283(22) : 15193-200

Curien G, Biou V, Mas-Droux C, Robert-Genthon M, Ferrer JL and Dumas R
Amino acid biosynthesis : new architectures in allosteric enzymes.
Plant Physiology and Biochemistry (2008) 46(3) : 325-339

de Rosny E, de Groot A, Jullian-Binard C, Borel F, Suarez C, Le Pape L, Fontecilla-Camps JC and Jouve HM
DHR51, the Drosophila melanogaster homologue of the human photoreceptor cell-specific nuclear receptor, is a thiolate heme-binding protein.
Biochemistry (2008) 47(50) : 13252-60

Debonis S, Skoufias DA, Indorato RL, Liger F, Marquet B, Laggner C, Joseph B and Kozielski F
Structure-activity relationship of S-trityl-L-cysteine analogues as inhibitors of the human mitotic kinesin Eg5.
Journal of Medicinal Chemistry (2008) 51(5) : 1115-1125

Dehez F, Pebay-Peyroula E and Chipot C
Binding of ADP in the mitochondrial ADP/ATP carrier is driven by an electrostatic funnel.
Journal of the American Chemical Society (2008) 130(38) : 12725-33

Diemer H, Elias M, Renault F, Rochu D, Contreras-Martel C, Schaeffer C, Van Dorsselaer A and Chabriere E
Tandem use of X-ray crystallography and mass spectrometry to obtain ab initio the complete and exact amino acids sequence of HPBP, a human 38-kDa apolipoprotein.
Proteins (2008) 71(4) : 1708-20

Dupuis JP, Revilloud J, Moreau CJ and Vivaudou M
Three C-terminal residues from the sulphonylurea receptor contribute to the functional coupling between the K(ATP) channel subunits SUR2A and Kir6.2.
Journal of Physiology (2008) 586(13) : 3075-85

Ebel C
Characterization and stabilization of solubilized membrane proteins.
Biotechnology and Biotechnological Equipment (2008) 22 : 620-624

El Bakkouri M, Fabry CM, Fender P and Schoehn G
Adenoviruses structure.
Virologie (2008) 12(4) : 275-292

El Bakkouri M, Seiradake E, Cusack S, Ruigrok RWH and Schoehn G
Structure of the C-terminal head domain of the fowl adenovirus type 1 short fibre.
Virology (2008) 378(1) : 169-176

Elias M, Dupuy J, Merone L, Mandrich L, Porzio E, Moniot S, Rochu D, Lecomte C, Rossi M, Masson P, Manco G and Chabriere E
Structural basis for natural lactonase and promiscuous phosphotriesterase activities.
Journal of Molecular Biology (2008) 379(5) : 1017-1028

Erlich P, Cesbron JY, Lemaire-Vieille C, Curt A, Andrieu JP, Schoehn G, Jamin M and Gagnon J
PrP N-terminal domain triggers PrPSc-like aggregation of Dpl.
Biochemical and Biophysical Research Communications (2008) 365(3) : 478-483

Estrozi LF and Navaza J
Fast projection matching for cryo-electron microscopy image reconstruction.
Journal of Structural Biology (2008) 162(2) : 324-334

Estrozi LF, Neumann E, Squires G, Rozas-Dennis G, Costabel M, Rey FA, Guerin DM and Navaza J
Phasing of the Triatoma virus diffraction data using a cryo-electron microscopy reconstruction.
Virology (2008) 375(1) : 85-93

Fdez Galvan I, Volbeda A, Fontecilla-Camps JC and Field MJ
A QM/MM study of proton transport pathways in a [NiFe] hydrogenase.
Proteins (2008) 73(1) : 195-203

Fender P, Schoehn G, Perron-Sierra F, Tucker GC and Lortat-Jacob H
Adenovirus dodecahedron cell attachment and entry are mediated by heparan sulfate and integrins and vary along the cell cycle.
Virology (2008) 371(1) : 155-164

Ferrer JL, Austin MB, Stewart Jr C and Noel JP
Structure and function of enzymes involved in the biosynthesis of phenylpropanoids.
Plant Physiology and Biochemistry (2008) 46(3) : 356-370

Field MJ
The pDynamo program for molecular simulations using hybrid quantum chemical and molecular mechanical potentials.
Journal of Chemical Theory and Computation (2008) 4(7) : 1151-1161

Fioravanti E, Dura MA, Lascoux D, Micossi E, Franzetti B and McSweeney S
Structure of the stress response protein DR1199 from Deinococcus radiodurans : A member of the DJ-1 superfamily.
Biochemistry (2008) 47(44) : 11581-11589

Fontecilla Camps JC and Volbeda A (2008)
CO deshydrogenase / Acetyl CoA synthase In Handbook of Metalloproteins, édité par A. Messerschmidt, John Wiley & Sons, pp in press (DOI : 10.1002/0470028637.met212)

Francesca N, Peters J, Russo D, Barbieri S, Chiapponi C, Cupane A, Deriu A, Di Bari MT, Farhi E, Gerelli Y, Mariani P, Paciaroni A, Rivasseau C, Schiro G and Sonvico F
IN13 backscattering spectrometer at ILL : Looking for motions in biological macromolecules and organisms.
Neutron News (2008) 19(4) : 14 -18

Franqueville L, Henning P, Magnusson M, Vigne E, Schoehn G, Blair-Zajdel ME, Habib N, Lindholm L, Blair GE, Hong SS and Boulanger P
Protein crystals in Adenovirus type 5-infected cells : requirements for intranuclear crystallogenesis, structural and functional analysis.
PLoS ONE (2008) 3(8) : e2894

Gabel F, Simon B, Nilges M, Petoukhov M, Svergun D and Sattler M
A structure refinement protocol combining NMR residual dipolar couplings and small angle scattering restraints.
Journal of Biomolecular NMR (2008) 41(4) : 199-208

Gaillard J, Neumann E, Van Damme D, Stoppin-Mellet V, Ebel C, Barbier E, Geelen D and Vantard M
Two microtubule-associated proteins of Arabidopsis MAP65s promote anti-parallel microtubule bundling.
Molecular Biology of the Cell (2008) 19(10) : 4534-4544

Galvan IF and Field MJ
Improving the efficiency of the NEB reaction path finding algorithm.
Journal of Computational Chemistry (2008) 29(1) : 139-43

Garcia-Saez I, Docquier JD, Rossolini GM and Dideberg O
The three-dimensional structure of VIM-2, a Zn-[beta]-lactamase from Pseudomonas aeruginosa in its reduced and oxidised form.
Journal of Molecular Biology (2008) 375(3) : 604-611

Gershenzon NI, Skinner TE, Brutscher B, Khaneja N, Nimbalkar M, Luy B and Glaser SJ
Linear phase slope in pulse design : Application to coherence transfer.
Journal of Magnetic Resonance (2008) 192(2) : 235-243

Gohon Y, Dahmane T, Ruigrok RW, Schuck P, Charvolin D, Rappaport F, Timmins P, Engelman DM, Tribet C, Popot JL and Ebel C
Bacteriorhodopsin/amphipol complexes : structural and functional properties.
Biophysical Journal (2008) 94(9) : 3523-3537

Gordeliy VI and Moiseeva ES (2008)
Crystallization of membrane proteins In Soft matter : From synthetic to biological materials 2008, édité par G. Dhont, G. Gompper, G. Nägele, D. Richter and R. G. Winkler, FZJ Juelich

Grzela R, Szolajska E, Ebel C, Madern D, Favier A, Wojtal I, Zagorski W and Chroboczek J
Virulence factor of potato virus Y, genome-attached terminal protein VPg, is a highly disordered protein.
Journal of Biological Chemistry (2008) 283(1) : 213-21

Guardado-Calvo P, Vazquez-Iglesias L, Martinez-Costas J, Llamas-Saiz AL, Schoehn G, Fox GC, Hermo-Parrado XL, Benavente J and van Raaij MJ
Crystal structure of the Avian reovirus inner capsid protein sigmaA.
Journal Of Virology (2008) 82(22) : 11208-11216

Gutsche I, Vujicic-Zagar A, Siebert X, Servant P, Vannier F, Castaing B, Gallet B, Heulin T, de Groot A, Sommer S and Serre L
Complex oligomeric structure of a truncated form of DdrA : A protein required for the extreme radiotolerance of Deinococcus.
Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics (2008) 1784(7-8) : 1050-1058

Haugland GH, Innselset M, Madern D and Birkeland NK
Characterization of the Cd6c homologues from the Euryarchaeon Thermoplasma acidophilum.
The Open Microbiology Journal (2008) 2 : 129-134

Heymann M, Paramelle D, Subra G, Forest E, Martinez J, Geourjon C and Deleage G
MSX-3D : a tool to validate 3D protein models using mass spectrometry.
Bioinformatics (2008) 24(23) : 2782-2783

Heyraud S, Jaquinod M, Durmort C, Concord E, Schaal JP, Huber P and Gulino-Debrac D
Contribution of annexin II to the architecture of mature endothelial adherens junctions.
Molecular and Cellular Biology (2008) 28(5) : 1657-1668

Humljan J, Kotnik M, Contreras-Martel C, Blanot D, Urleb U, Dessen A, Solmajer T and Gobec S
Novel naphthalene-N-sulfonyl-D-glutamic acid derivatives as inhibitors of MurD, a key peptidoglycan biosynthesis enzyme.
Journal of Medicinal Chemistry (2008) 51(23) : 7486-94

Hus JC, Salmon L, Bouvignies G, Lotze J, Blackledge M and Bruschweiler R
16-fold degeneracy of peptide plane orientations from residual dipolar couplings : Analytical treatment and implications for protein structure determination.
Journal of the American Chemical Society (2008) 130(47) : 15927-15937

Jasnin M, Moulin M, Haertlein M, Zaccai G and Tehei M
Down to atomic-scale intracellular water dynamics.
EMBO Reports (2008) 9(6) : 543-547

Jasnin M, Moulin M, Haertlein M, Zaccai G and Tehei M
In vivo measurement of internal and global macromolecular motions in Escherichia coli.
Biophysical Journal (2008) 95(2) : 857-864

Jasnin M, Moulin M, Haertlein M, Zaccai G and Tehei M
Down to atomic-scale intracellular water dynamics [erratum].
EMBO Reports (2008) 9(6) : 590

Jasnin M, Tehei M, Moulin M, Haertlein M and Zaccai G
Solvent isotope effect on macromolecular dynamics in E. coli.
European Biophysical Journal (2008) 37(5) : 613-617

Jensen MR and Blackledge M
On the origin of NMR dipolar waves in transient helical elements of partially folded proteins.
Journal of the American Chemical Society (2008) 130(34) : 11266-7

Jensen MR, Houben K, Lescop E, Blanchard L, Ruigrok RW and Blackledge M
Quantitative conformational analysis of partially folded proteins from residual dipolar couplings : application to the molecular recognition element of Sendai virus nucleoprotein.
Journal of the American Chemical Society (2008) 130(25) : 8055-61

Job V, Carapito R, Vernet T, Dessen A and Zapun A
Common alterations in PBP1a from resistant Streptococcus pneumoniae decrease its reactivity toward beta-lactams : STRUCTURAL INSIGHTS.
Journal of Biological Chemistry (2008) 283(8) : 4886-94

Karlsson QH, Schelcher C, Verrall E, Petosa C and Sinclair AJ
Methylated DNA recognition during the reversal of epigenetic silencing is regulated by cysteine and serine residues in the Epstein-Barr virus lytic switch protein.
PLoS Pathogens (2008) 4(3) : e1000005

Karlsson QH, Schelcher C, Verrall E, Petosa C and Sinclair AJ
The reversal of epigenetic silencing of the EBV genome is regulated by viral bZIP protein.
Biochemical Society Transactions (2008) 36(Pt 4) : 637-9

Kern T, Hediger S, Muller P, Giustini C, Joris B, Bougault C, Vollmer W and Simorre JP
Toward the characterization of peptidoglycan structure and protein-peptidoglycan interactions by solid-state NMR spectroscopy.
Journal of the American Chemical Society (2008) 130(17) : 5618-9

Kern T, Schanda P and Brutscher B
Sensitivity-enhanced IPAP-SOFAST-HMQC for fast-pulsing 2D NMR with reduced radiofrequency load.
Journal of Magnetic Resonance (2008) 190(2) : 333-338

Kerr FK, Thomas AR, Wijeyewickrema LC, Whisstock JC, Boyd SE, Kaiserman D, Matthews AY, Bird PI, Thielens NM, Rossi V and Pike RN
Elucidation of the substrate specificity of the MASP-2 protease of the lectin complement pathway and identification of the enzyme as a major physiological target of the serpin, C1-inhibitor.
Molecular Immunology (2008) 45(3) : 670-677

Koza MM, Schober H, Parker SF and Peters J
Vibrational dynamics and phonon dispersion of polycrystalline ice XII and of high-density amorphous ice.
Physical Review B (2008) 77(10) : n°104306

Kozielski F, Skoufias DA, Indorato RL, Saoudi Y, Jungblut PR, Hustoft HK, Strozynski M and Thiede B
Proteome analysis of apoptosis signaling by S-trityl-L-cysteine, a potent reversible inhibitor of human mitotic kinesin Eg5.
Proteomics (2008) 8(2) : 289-300

Lacroix M, Dumestre-Pérard C, Houen G, Arlaud G and Thielens N
Residue Lys57 in the collagen-like region of human l-ficolin and its counterpart Lys47 in H-ficolin play an essential role in interaction with the MASPs and the collectin co-receptor calreticulin.
Molecular Immunology (2008) 45(16) : 4134-4134

Lafaye C, Iwena T, Ferrer JL, Kroll JS, Griat M and Serre L
Preliminary crystallographic data of the three homologues of the thiol-disulfide oxidoreductase DsbA in Neisseria meningitidis.
Acta Crystallographica Section F Structural Biology Crystallography Communication (2008) 64(Pt 2) : 111-4

Laguri C, Arenzana-Seisdedos F and Lortat-Jacob H
Relationships between glycosaminoglycan and receptor binding sites in chemokines-the CXCL12 example.
Carbohydrate Research (2008) 343(12) : 2018-2023

Lata S, Schoehn G, Jain A, Pires R, Piehler J, Gottlinger HG and Weissenhorn W
Helical structures of ESCRT-III are disassembled by VPS4.
Science (2008) 321(5894) : 1354-7

Lefmann K, Willendrup PK, Udby L, Lebech B, Mortensen K, Birk JO, KlenØ K, Knudsen E, Christiansen P, Saroun J, Kulda J, Filges U, Konnecke M, Tregenna-Piggott P, Peters J, Lieutenant K, Zsigmond G, Bentley P and Farhi E
Virtual experiments : the ultimate aim of neutron ray-tracing simulations.
Journal of Neutron Research (2008) 16(3) : 97-111

Le Gouellec A, Roux L, Fadda D, Massidda O, Vernet T and Zapun A
Roles of pneumococcal DivIB in cell division.
Journal of Bacteriology (2008) 190(13) : 4501-11

le Maire M, Arnou B, Olesen C, Georgin D, Ebel C and Moller JV
Gel chromatography and analytical ultracentrifugation to determine the extent of detergent binding and aggregation, and Stokes radius of membrane proteins using sarcoplasmic reticulum Ca2+-ATPase as an example.
Nature Protocols (2008) 3(11) : 1782-95

Leroux F, Dementin S, Burlat B, Cournac L, Volbeda A, Champ S, Martin L, Guigliarelli B, Bertrand P, Fontecilla-Camps J, Rousset M and Leger C
Experimental approaches to kinetics of gas diffusion in hydrogenase.
Proceedings of the National Academy of Sciences U S A (2008) 105(32) : 11188-93

Lescop E, Rasia R and Brutscher B
Hadamard amino-acid-type edited NMR experiment for fast protein resonance assignment.
Journal of the American Chemical Society (2008) 130(15) : 5014-5

Li YL, Maurel MC, Ebel C, Vergne J, Pipich V and Zaccai G
Self-association of adenine-dependent hairpin ribozymes.
European Biophysics Journal (2008) 37(2) : 173-182

Libersou S, Siebert X, Ouldali M, Estrozi LF, Navaza J, Charpilienne A, Garnier P, Poncet D and Lepault J
Geometric mismatches within the concentric layers of rotavirus particles : a potential regulatory switch of viral particle transcription activity.
Journal Of Virology (2008) 82(6) : 2844-52

Lienard BM, Garau G, Horsfall L, Karsisiotis AI, Damblon C, Lassaux P, Papamicael C, Roberts GC, Galleni M, Dideberg O, Frere JM and Schofield CJ
Structural basis for the broad-spectrum inhibition of metallo-beta-lactamases by thiols.
Organic and Biomolecular Chemistry (2008)6(13) : 2282-94

Loisel E, Jacquamet L, Serre L, Bauvois C, Ferrer JL, Vernet T, Di Guilmi AM and Durmort C
AdcAII : A new pneumococcal Zn-binding protein homologous with ABC transporters : biochemical and structural analysis.
Journal of Molecular Biology (2008) 381(3) : 594-606

Lundqvist J, Gallet B, Noirclerc-Savoye M and Vernet T
Automation of high-throughput expression screening on His MultiTrap HP with vacuum elution using a Hamilton Liquid Handling Workstation.
Discovery Matters (2008) : 14-15

Ma YJ, Doni A, Honoré C, Mantovani A, Thielens NM and Garred P
Biochemical and functional characterisation of the interaction between pentraxin 3 and the ficolins.
Molecular Immunology (2008) 45(16) : 4135-4135

Macheboeuf P, Lemaire D, Dos Santos Martins A, Dideberg O, Jamin M and Dessen A
Trapping of an acyl-enzyme intermediate in a Penicillin-Binding Protein (PBP)-catalyzed reaction.
Journal of Molecular Biology (2008) 276(2) : 405-413

Manzano C, Contreras-Martel C, El Mortaji L, Izoré T, Fenel D, Vernet T, Schoehn G, Di Guilmi AM and Dessen A
Sortase-mediated pilus fiber biogenesis in Streptococcus pneumoniae.
Structure (2008) 16(12) : 1838-1848

Marx JC, Poncin J, Simorre JP, Ramteke PW and Feller G
The noncatalytic triad of alpha-amylases : A novel structural motif involved in conformational stability.
Proteins (2008) 70(2) : 320-328

Maurer P, Koch B, Zerfass I, Krauss J, van der Linden M, Frère JM, Contreras-Martel C and Hakenbeck R
Penicillin-binding protein 2x of Streptococcus pneumoniae : Three new mutational pathways for remodelling an essential enzyme into a resistance determinant.
Journal of Molecular Biology (2008) 376(5) : 1403-1416

Meier S, Blackledge M and Grzesiek S
Conformational distributions of unfolded polypeptides from novel NMR techniques.
Journal of Chemical Physics (2008) 128(5) : 052204

Mercey E, Sadir R, Maillart E, Roget A, Baleux F, Lortat-Jacob H and Livache T
Polypyrrole oligosaccharide array and surface plasmon resonance imaging for the measurement of glycosaminoglycan binding interactions.
Analytical Chemistry (2008) 80(9) : 3476-3482

Moreau C, Dupuis JP, Revilloud J, Arumugam K and Vivaudou M
Coupling ion channels to receptors for biomolecule sensing.
Nature Nanotechnology (2008) 3(10) : 620-625

Mylonas E, Hascher A, Bernado P, Blackledge M, Mandelkow E and Svergun DI
Domain conformation of tau protein studied by solution small-angle X-ray scattering.
Biochemistry (2008) 47(39) : 10345-10353

Nauton L, Kahn R, Garau G, Hernandez JF and Dideberg O
Structural insights into the design of inhibitors for the L1 metallo-beta-lactamase from Stenotrophomonas maltophilia.
Journal of Molecular Biology (2008) 375(1) : 257-69

Navaza J
Combining X-ray and electron-microscopy data to solve crystal structures.
Acta Crystallographica D Biological Crystallography (2008) 64(Pt 1) : 70-5

Nicolet Y, Rubach JK, Posewitz MC, Amara P, Mathevon C, Atta M, Fontecave M and Fontecilla-Camps JC
X-ray structure of the [fefe]-hydrogenase maturase hydE from thermotoga maritima.
Journal of Biological Chemistry (2008) 283 : 18861-18872

Nodet G, Abergel D and Bodenhausen G
Predicting NMR relaxation rates in anisotropically tumbling proteins through networks of coupled rotators.
Chemphyschem (2008) 9(4) : 625-33

Nury H, Manon F, Arnou B, le Maire M, Pebay-Peyroula E and Ebel C
Mitochondrial bovine ADP/ATP carrier in detergent is predominantly monomeric but also forms multimeric species (dagger).
Biochemistry (2008) 47(47) : 12319-12331

Orelle C, Gubellini F, Durand A, Marco S, Levy D, Gros P, Pietro AD and Jault JM
Conformational change induced by ATP binding in the multidrug ATP-binding cassette transporter BmrA.
Biochemistry (2008) 47(8) : 2404-2412

Pagh R, Duus K, Laursen I, Hansen PR, Mangor J, Thielens N, Arlaud GJ, Kongerslev L, Hojrup P and Houen G
The chaperone and potential mannan-binding lectin (MBL) co-receptor calreticulin interacts with MBL through the binding site for MBL-associated serine proteases.
Febs Journal (2008) 275(3) : 515-526

Pagliero E, Dublet B, Frehel C, Dideberg O, Vernet T and Di Guilmi AM
The inactivation of a new peptidoglycan hydrolase Pmp23 leads to abnormal septum formation in Streptococcus pneumoniae.
The Open Microbiology Journal (2008) 2 : 107-114

Paidassi H, Tacnet-Delorme P, Garlatti V, Darnault C, Ghebrehiwet B, Gaboriaud C, Arlaud GJ and Frachet P
C1q binds phosphatidylserine and likely acts as a multiligand-bridging molecule in apoptotic cell recognition.
Journal of Immunology (2008) 180(4) : 2329-38

Païdassi H, Tacnet-Delorme P, Lunardi T, Arlaud GJ, Thielens NM and Frachet P
The lectin-like activity of human C1q and its implication in DNA and apoptotic cell recognition.
FEBS Letters (2008) 582(20) : 3111-3116

Parkin A, Goldet G, Cavazza C, Fontecilla-Camps JC and Armstrong FA
The difference a Se makes ? Oxygen-Tolerant hydrogen production by the [NiFeSe]-hydrogenase from Desulfomicrobium baculatum.
Journal of the American Chemical Society (2008) 130(40) : 13410-6

Peters J and Tehei M (2008)
Molecular biophysics : understanding living processes In Neutrons and Health, ESS Scandinavia report, pp 6-7

Pompidor G, D’Aleo A, Vicat J, Toupet L, Giraud N, Kahn R and Maury O
Protein crystallography through supramolecular interactions between a lanthanide complex and arginine.
Angewandte Chemie International Edition England (2008) 47(18) : 3388-3391

Pompidor G, Maillard AP, Girard E, Gambarelli S, Kahn R and Coves J
X-ray structure of the metal-sensor CnrX in both the apo- and copper-bound forms.
FEBS Letters (2008) 582(28) : 3954-8

Pous J, Urpi L, Subirana JA, Gouyette C, Navaza J and Campos JL
Stabilization by extra-helical thymines of a DNA duplex with hoogsteen base pairs.
Journal of the American Chemical Society (2008) 130(21) : 6755-6760

Ram N, Aroui S, Jaumain E, Bichraoui H, Mabrouk K, Ronjat M, Lortat-Jacob H and De Waard M
Direct peptide interaction with surface glycosaminoglycans contributes to the cell penetration of maurocalcine.
Journal of Biological Chemistry (2008) 283(35) : 24274-84

Reina JJ, Diaz I, Nieto PM, Campillo NE, Paez JA, Tabarani G, Fieschi F and Rojo J
Docking, synthesis, and NMR studies of mannosyl trisaccharide ligands for DC-SIGN lectin.
Organic and Biomolecular Chemistry (2008) 6(15) : 2743-54

Ribeiro EA, Favier A, Gerard FCA, Leyrat C, Brutscher B, Blondel D, Ruigrok RW, Blackledge M and Jamin M
Solution structure of the C-terminal nucleoprotein-RNA binding domain of the vesicular stomatitis virus phosphoprotein.
Journal of Molecular Biology (2008) 382(2) : 525-538

Roumenina LT, Popov K, Radanova M, Gaboriaud C, Fremeaux-Bacchi V and Atanasov B
Dissection of the C1q-C-reactive protein interaction-A model for understanding the versatile C1q binding to target molecules.
Molecular Immunology (2008) 45(16) : 4140-4141

Rueda P, Balabanian K, Lagane B, Staropoli I, Chow K, Levoye A, Laguri C, Sadir R, Delaunay T, Izquierdo E, Pablos JL, Lendinez E, Caruz A, Franco D, Baleux F, Lortat-Jacob H and Arenzana-Seisdedos F
The CXCL12gamma chemokine displays unprecedented structural and functional properties that make it a paradigm of chemoattractant proteins.
PLoS ONE (2008) 3(7) : e2543

Schanda P, Brutscher B, Konrat R and Tollinger M
Folding of the KIX domain : Characterization of the equilibrium analog of a folding intermediate using 15N/13C relaxation dispersion and fast 1H/2H amide exchange NMR spectroscopy.
Journal of Molecular Biology (2008) 380(4) : 726-741

Schoehn G, El Bakkouri M, Fabry CM, Billet O, Estrozi LF, Le L, Curiel DT, Kajava AV, Ruigrok RW and Kremer EJ
Three-dimensional structure of canine adenovirus serotype 2 capsid.
Journal of Virology (2008) 82(7) : 3192-203

Schoehn G and Ruigrok RWH (2008)
Techniques to prepare viruses and viral proteins for observation by electron microscopy In Encyclopedia of Virology, Third Edition édité par Mahy and v. Regenmortel, Elsevier

Sharma KS, Durand G, Giusti F, Olivier B, Fabiano AS, Bazzacco P, Dahmane T, Ebel C, Popot JL and Pucci B
Glucose-based amphiphilic telomers designed to keep membrane proteins soluble in aqueous solutions : synthesis and physicochemical characterization.
Langmuir (2008) 24(23) : 13581-90

Sorensen HP, Vives RR, Manetopoulos C, Albrechtsen R, Lydolph MC, Jacobsen J, Couchman JR and Wewer UM
Heparan sulfate regulates ADAM12 through a molecular switch mechanism.
Journal of the Biological Chemistry (2008) 283(46) : 31920-32

Stuhrmann HB
Small-angle scattering and its interplay with crystallography, contrast variation in SAXS and SANS.
Acta Crystallographica A (2008) 64(Pt 1) : 181-91

Tacnet P, Cheong EC, Goeltz P, Ghebrehiwet B, Arlaud GJ, Liu XY and Lesieur C
Trimeric reassembly of the globular domain of human C1q.
Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics (2008) 1784(3) : 518-529

Tao Y, Ferrer JL, Ljung K, Pojer F, Hong F, Long JA, Li L, Moreno JE, Bowman ME, Ivans LJ, Cheng Y, Lim J, Zhao Y, Ballaré CL, Sandberg G, Noel JP and Chory J
Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants.
Cell (2008) 133(1) : 164-176

Taveau JC, Dubois M, Le Bihan O, Trepout S, Almagro S, Hewat E, Durmort C, Heyraud S, Gulino-Debrac D and Lambert O
Structure of artificial and natural VE-cadherin-based adherens junctions.
Biochemical Society Transactions (2008) 36(Pt 2) : 189-93

Teillet F, Gaboriaud C, Lacroix M, Martin L, Arlaud GJ and Thielens NM
Crystal structure of the CUB1-EGF-CUB2 domain of human MASP-1/3 and identification of its interaction sites with mannan-binding lectin and ficolins.
Journal of Biological Chemistry (2008) 283(37) : 25715-24

Teixeira SC, Ankner J, Bellissent-Funel MC, Bewley R, Blakeley MP, Coates L, Dahint R, Dalgliesh R, Dencher N, Dhont J, Fischer P, Forsyth VT, Fragneto G, Frick B, Geue T, Gilles R, Gutberlet T, Haertlein M, Hauss T, Haussler W, Heller WT, Herwig K, Holderer O, Juranyi F, Kampmann R, Knott R, Kohlbrecher J, Kreuger S, Langan P, Lechner R, Lynn G, Majkrzak C, May R, Meilleur F, Mo Y, Mortensen K, Myles DA, Natali F, Neylon C, Niimura N, Ollivier J, Ostermann A, Peters J, Pieper J, Ruhm A, Schwahn D, Shibata K, Soper AK, Straessle T, Suzuki UI, Tanaka I, Tehei M, Timmins P, Torikai N, Unruh T, Urban V, Vavrin R, Weiss K and Zaccai G
New sources and instrumentation for neutrons in biology.
Chemical Physics (2008) 345(2-3) : 133-151

Terzic A, Vivaudou M, Moreau C, Olson TM, Jahangir A, Zingman LV and Alekseev AE (2008)
Channelopathies of cardiac inwardly rectifying potassium channels In Electrical diseases of the heart and sudden cardiac death : genetics, mechanisms, treatment and prevention, édité par I. Gussak, C. Antzelevitch, A. Wilde, P. Friedman, M. Ackerman and W. K. Shen, Springer, pp 328

Thepaut M, Vives C, Pompidor G, Kahn R and Fieschi F
Overproduction, purification and preliminary crystallographic analysis of the carbohydrate-recognition domain of human langerin.
Acta Crystallographica Section F Structural Biology Crystallography Communication (2008) 64(Pt 2) : 115-8

Timpano G, Tabarani G, Anderluh M, Invernizzi D, Vasile F, Potenza D, Nieto PM, Rojo J, Fieschi F and Bernardi A
Synthesis of novel DC-SIGN ligands with an alpha-fucosylamide anchor.
Chembiochem (2008) 9(12) : 1921-30

Tousch D, Lajoix AD, Hosy E, Azay-Milhau J, Ferrare K, Jahannault C, Cros G and Petit P
Chicoric acid, a new compound able to enhance insulin release and glucose uptake.
Biochemical and Biophysical Research Communications (2008) 377(1) : 131-135

Trapani S and Navaza J
AMoRe : classical and modern.
Acta Crystallographica D Biological Crystallography (2008) 64(Pt 1) : 11-6

Trindade MB, Job V, Contreras-Martel C, Pelicic V and Dessen A
Structure of a widely conserved type IV pilus biogenesis factor that affects the stability of secretin multimers.
Journal of Molecular Biology (2008) 378(5) : 1031-1039

Ujwal R, Cascio D, Colletier JP, Faham S, Zhang J, Toro L, Ping P and Abramson J
The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating.
Proceedings of the National Academy of Sciences U S A (2008) 105(46) : 17742-7

Van Melckebeke H, Devany M, Di Primo C, Beaurain F, Toulme JJ, Bryce DL and Boisbouvier J
Liquid-crystal NMR structure of HIV TAR RNA bound to its SELEX RNA aptamer reveals the origins of the high stability of the complex.
Proceedings of the National Academy of Sciences U S A (2008) 105(27) : 9210-5

Vos MH, Battistoni A, Lechauve C, Marden MC, Kiger L, Desbois A, Pilet E, de Rosny E and Liebl U
Ultrafast heme-residue bond formation in six-coordinate heme proteins : implications for functional ligand exchange.
Biochemistry (2008) 47(21) : 5718-23

Wang F, Marshall CB, Yamamoto K, Li GY, Plevin MJ, You H, Mak TW and Ikura M
Biochemical and structural characterization of an intramolecular interaction in FOXO3a and its binding with p53.
Journal of Molecular Biology (2008) 384(3) : 590-603

Wells M, Tidow H, Rutherford TJ, Markwick P, Jensen MR, Mylonas E, Svergun DI, Blackledge M and Fersht AR
Structure of tumor suppressor p53 and its intrinsically disordered N-terminal transactivation domain.
Proceedings of the National Academy of Sciences U S A (2008) 105(15) : 5762-7

Wheeler A, Wang C, Yang K, Fang K, Davis K, Styer AM, Mirshahi U, Moreau C, Revilloud J, Vivaudou M, Liu S, Mirshahi T and Chan K
Coassembly of different sulfonylurea receptor subtypes extends the phenotypic diversity of ATP-sensitive potassium (KATP) channels.
Molecular Pharmacology (2008) 74 : 1333-1344

Wicker-Planquart C, Foucher AE, Louwagie M, Britton RA and Jault JM
Interactions of an essential Bacillus subtilis GTPase, YsxC, with ribosomes.
Journal of Bacteriology (2008) 190(2) : 681-90

Wijeyewickrema LC, Quinsey N, Thielens N, Boyd SE, Matthews AY, Kaiserman D, Bird PI and Pike RN
Determination of the substrate specificity of the MASP-1 protease of the complement pathway provides initial insights into potential physiological roles.
Molecular Immunology (2008) 45(16) : 4136-4136

Wood K, Frolich A, Paciaroni A, Moulin M, Hartlein M, Zaccai G, Tobias DJ and Weik M
Coincidence of dynamical transitions in a soluble protein and its hydration water : direct measurements by neutron scattering and MD simulations.
Journal of the American Chemical Society (2008) 130(14) : 4586-7

Wood K, Grudinin S, Kessler B, Weik M, Johnson M, Kneller GR, Oesterhelt D and Zaccai G
Dynamical heterogeneity of specific amino acids in bacteriorhodopsin.
Journal of Molecular Biology (2008) 380(3) : 581-591

Wood K, Lehnert U, Kessler B, Zaccai G and Oesterhelt D
Hydration dependence of active core fluctuations in bacteriorhodopsin.
Biophysical Journal (2008) 95(1) : 194-202

Wood K, Plazanet M, Gabel F, Kessler B, Oesterhelt D, Zaccai G and Weik M
Dynamics of hydration water in deuterated purple membranes explored by neutron scattering.
European Biophysical Journal (2008) 37(5) : 619-626

Xu Y, Colletier JP, Jiang H, Silman I, Sussman JL and Weik M
Induced-fit or preexisting equilibrium dynamics ? Lessons from protein crystallography and MD simulations on acetylcholinesterase and implications for structure-based drug design.
Protein Science (2008) 17(4) : 601-5

Xu Y, Colletier JP, Weik M, Jiang H, Moult J, Silman I and Sussman JL
Flexibility of aromatic residues in the active-site gorge of acetylcholinesterase : X-ray versus molecular dynamics.
Biophysical Journal (2008) 95(5) : 2500-11

Zapun A, Contreras-Martel C and Vernet T
Penicillin-binding proteins and beta-lactam resistance.
FEMS Microbiology Reviews (2008) 32(2) : 361-85

Zapun A, Vernet T and Pinho MG
The different shapes of cocci.
FEMS Microbiology Reviews (2008) 32(2) : 345-60

Zhao N, Ferrer JL, Ross J, Guan J, Yang Y, Pichersky E, Noel JP and Chen F
Structural, biochemical, and phylogenetic analyses suggest that indole-3-acetic acid methyltransferase is an evolutionarily ancient member of the SABATH family.
Plant Physiology (2008) 146(2) : 455-67

Zoropogui A, Gambarelli S and Coves J
CzcE from Cupriavidus metallidurans CH34 is a copper-binding protein.
Biochemical and Biophysical Research Communications (2008) 365(4) : 735-9
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