Institut de Biologie StructuraleGrenoble / France


Adam V, Berardozzi R, Byrdin M, Bourgeois D
Phototransformable fluorescent proteins : future challenges
Current Opinion in Chemical Biology, in press

Adam V
Phototransformable fluorescent proteins : which one for which application ? Histochemistry and Cell Biology DOI : 10.1007/s00418­‐014‐1190‐5

Aleksandrov A, Zverena E, Field MJ.
The Mechanism of Citryl-­‐Coenzyme A Formation Catalyzed by Citrate Synthase.
J Phys Chem B 118 : 4505–4513

Amara MS, Rouzière S, Paineau E, Bacia-Verloop M, Thill A and Launois P
Hexagonalization of Aluminogermanate Imogolite Nanotubes Organized into Closed-Packed Bundles.
J. Phys. Chem. C(2014).

Appolaire A, Durá MA, Ferruit M, Andrieu JP, Godfroy A, Gribaldo S and Franzetti B
The TET2 and TET3 aminopeptidases from Pyrococcus horikoshii form a hetero-subunit peptidasome with enhanced peptide destruction properties.
Mol. Microbiol. 94(4):803-14.

Appolaire A, Girard E, Colombo M, Durá MA, Moulin M, Härtlein M, Franzetti B and Gabel F
Small angle neutron scattering reveals the assembling mode and oligomeric architecture of TET, a large, dodecameric aminopeptidase.
Acta Crystallogr D Biol Crystallogr. D70 doi:10.1107/S1399004714018446.

Avilov S, Berardozzi R, Gunewardene MS, Adam V, Hess ST and Bourgeois D
In cellulo Evaluation of Phototransformation Quantum Yields in Fluorescent Proteins Used as Markers for Single-­‐Molecule Localization Microscopy.
PLoS One in press

Barbet-Massin E, Schneider R, Felletti M, Jehle S, Communie G, Martinez N, Jensen MR, Ruigrok RWH, Emsley L, Lesage A, Blackledge M, Pintacuda P
Insights into the structure and dynamics of measles virus nucleocapsids by 1H-detected solid-state
NMR Biophys. J (In Press)

Beaumel S, Grunwald D, Fieschi F, Stasia MJ.
Identification of NOX2 regions for normal biosynthesis of cytochrome b558 in phagocytes - Highlighting essential residues for p22phox binding.
Biochem J. 464, 425-437.

Bhattacharjee A, Weiss AKH, Artero V, Field MJ, Hofer TS
Electronic Structure and Hydration of Tetramine Cobalt Hydride Complexes.
J Phys Chem B 118 : 5551–5561

Blanc M, Coetzer TL, Blackledge M, Haertlein M, Mitchell EP, Forsyth VT, Jensen MR.
Intrinsic disorder within the erythrocyte binding-like proteins from Plasmodium falciparum.
Biochim Biophys Acta ;1844(12):2306-2314

Boeri Erba E.
Investigating macromolecular complexes using top-down mass spectrometry.
Proteomics 14:1259-70.

Borel F, Hachi I, Palencia A, Gaillard M-C, Ferrer J-L
Crystal Structure of mouse Mu-crystallin complexed with NADPH and the T3 thyroid hormon
FEBS Journal (2014) 281 : 1598-1612

Borshchevskiy V, Round E, Erofeev I, Weik M, Ishchenko A, Gushchin I, Mishin, A, Willbold D, Büldt G, Gordeliy, V
Low dose X-‐ray radiation induces structural alterations in proteins.
Acta Cryst. D., 70 (Pt 10):2675-85

Boyer M, Paineau E, Bacia-Verloop M and Thill A
Aqueous dispersion state of amphiphilic hybrid aluminosilicate nanotubes.
Applied Clay Science 96:45-49.

Brus B, Kosak U, Turk S, Pislar A, Coquelle N, Kos J, Stojan J, Colletier J-P, Gobec S.
Discovery, Biological Evaluation, and Crystal Structure of a Novel Nanomolar Selective Butyrylcholinesterase Inhibitor.
Journal of Medicinal Chemistry 57 : 8167-8179

Candela T., Balomenou S., Aucher W., Bouriotis V., Simore J‐P., Fouet A., and Boneca I.
N‐Acetylglucosamine Deacetylases Modulate the Anchoring of the Gamma‐Glutamyl Capsule to the Cell Wall of Bacillus anthracis.
Microbial Drug Resistance 20(3) : 222‐230

Cano M, Volbeda A, Aubert-Jousset E, Guedeney G, Richaud P, Peltier G and Cournac L
Improved oxygen tolerance of the Synechocystis sp. PCC 6803 bidirectional hydrogenase by site-directed mutagenesis of putative residues of the gas diffusion channel.
International Journal of Hydrogen Energy (2014) 39(30) : 16872-16884

Chaves RC, Dahmane S, Odorico M, Nicolaes GAF and Pellequer J-L
Factor Va alternative conformation reconstruction using Atomic Force Microscopy. Thromb.
Haemost 112 : 1167-1173

Chaze T, Guillot A, Valot B, Langella O, Chamot-Rooke J, Di Guilmi AM, Trieu-Cuot P, Dramsi S, Mistou MY.
O‐glycosylation of the N-terminal region of the serine-rich adhesin Srr1 of Streptococcus agalactiae explored by mass spectrometry.
Mol Cell Proteomics. 13(9):2168-82.

Cherrier MV, Chan A, Darnault C, Reichmann D, Amara P, Ollagnier de Choudens S and Fontecilla-Camps JC
The Crystal Structure of Fe4S4 Quinolinate Synthase Unravels an Enzymatic Dehydration Mechanism That Uses Tyrosine and a Hydrolase-Type Triad.
Journal of the American Chemical Society (2014) 136(14) : 5253-5256

Chevalley A, Cherrier MV, Fontecilla-Camps JC, Ghasemi M and Salmain M
Artificial metalloenzymes derived from bovine β-lactoglobulin for the asymmetric transfer hydrogenation of an aryl ketone - synthesis, characterization and catalytic activity.
Dalton transactions (2014) 43(14):5482-5489.

Choudary OP, Paz A, Adelman JL, Colletier JP, Abramson J, Grabe M
Structure guided simulations illuminate the mechanism of ATP transport through VDAC1.
Nat Struct Mol Biol 21 : 626-‐632

Communie G, Ruigrok RWH, Jensen MR and Blackledge M
Intrinsically disordered proteins implicated in paramyxoviral replication machinery. Curr. Opin. Virol. 5, 72–81.

Compton EL, Page K, Findlay HE, Haertlein M, Moulin M, Zachariae U, Norman DG, Gabel F and Javelle A
Conserved structure and domain organisation amongst bacterial Slc26 transporters.
Biochem. J. [in press]

Crous W, Field MJ, Naidoo KJ.
Simple Link Atom Saccharide Hybrid (SLASH) Treatment for Glycosidic Bonds at the QM/MM Boundary.
J Chem Theor Comput 10 : 1727–1738

Crublet E, Kerfah R, Mas G, Noirclerc-Savoye M, Lantez V, Vernet T and Boisbouvier J.
A cost-effective protocol for the parallel production of libraries of 13CH3-specifically labeled mutants for NMR studies of high molecular weight proteins.
Methods in molecular biology 1091 : 229-244

Cupane A, Fomina M, Piazza I, Peters J, and Schirò G.
Experimental evidence for a liquid-liquid crossover in deeply cooled confined water.
Phys. Rev. Lett. 113 : 215701

Cupane A, Fomina M, and Schirò G.
The boson peak of deeply cooled confined water reveals the existence of a low-temperature liquid-liquid crossover.
Journal of Chemical Physics 141 : 18C510.

Dalonneau F, Liu XQ, Sadir R, Almodovar J, Mertani HC, Bruckert F, Albiges-Rizo C, Weidenhaupt M, Lortat-Jacob H and Picart C.
The effect of delivering the chemokine SDF-1α in a matrix-bound manner on myogenesis.
Biomaterials (2014) 35 : 4525-4535.

Derevyanko G, Grudinin S.
HermiteFit : fast-¬fitting atomic structures into a low-¬resolution density map using three-¬dimensional orthogonal Hermite functions.
Acta Crystallogr D Biol Crystallogr 70:2069-¬84

Desfosses A, Ciuffa R, Gutsche I and Sachse C
SPRING – an image processing package for single-particle based helical reconstruction from electron cryomicrographs.
J Struct Biol. (2014) 185(1):15-26.

Diotti RA, Mancini N, Clementi N, Sautto G, Moreno GJ, Criscuolo E, Cappelletti F, Man P, Forest E, Clementi M, Burioni R.
Cloning of the first human anti-­‐JCPyV/VP1 neutralizing monoclonal antibody : epitope definition and implications in risk stratification of patients under natalizumab therapy.
Antiviral Research 108, 94-103

Discola KF, Forster A, Boulay F, Simorre JP, Attree I, Dessen A, and Job V Membrane and chaperone recognition by the major translocator protein PopB of the type III secretion system of Pseudomonas aeruginosa.
J Biol. Chem 289:3591‐3601

Duan C, Adam V, Byrdin M and Bourgeois D
Structural basis of photoswitching in fluorescent proteins
In Methods in Molecular Biology, vol. 1148 , pp 177‐202.

Durand G, Abla M, Ebel C and Breyton C
New amphiphiles to handle membrane proteins : “ménage à trois” between chemistry, physical chemistry, and biochemistry
In Membrane Proteins Production for Structural Analysis, edited by Mus-­‐Veteau I, Springer, In press, DOI 10.1007/978­‐1­‐4939‐0662‐8_8. pp 205­‐252 [book chapter]

Durmort C. and J. Brown
Streptococcus Pneumoniae : Molecular mechanisms of host-­‐pathogen interactions
Edited by Brown, Hammerschmidt & Orihuela.
Elsevier (in press)

Egan AJ, Jean NL, Koumoutsi A, Bougault CM, Biboy J, Sassine J, Solovyova AS, Breukink E, Typas A, Vollmer W, Simorre JP
Outer‐membrane lipoprotein LpoB spans the periplasm to stimulate the peptidoglycan synthase PBP1B.
Proc Natl Acad Sci U S A. 111(22):8197‐8202

Falourd X, Natali F, Peters J, Foucat L.
Molecular mobility in Medicago truncatula seed during early stage of germination : Neutron Scattering and NMR investigations.
Chem. Phys. 428, 181­‐185.

Fender P
Use of dodecahedron "VLPs" as an alternative to the whole adenovirus.
Methods Mol Biol. ;1089:61-70.

Flayhan A, Vellieux FM, Lurz R, Maury O, Contreras-­‐Martel C, Girard E, Boulanger P, Breyton C.
Crystal structure of pb9, the distal tail protein of bacteriophage T5 : a conserved structural motif among all siphophages.
Journal of Virology 88(2):820-­‐828

Fleurie A, Manuse S, Zhao C, Campo N, Cluzel C, Lavergne JP, Freton C, Combet C, Guiral S, Soufi B, Macek B, Kuru E, VanNieuwenhze MS, Brun YV, Di Guilmi AM, Claverys JP, Galinier A, Grangeasse C.
Interplay of the serine/threonine-kinase StkP and the paralogs DivIVA and GpsB in pneumococcal cell elongation and division.
PLoS Genet. Apr 10 ;10(4):e1004275.

Fontecilla-Camps JC
The stereochemical basis of the genetic code and the (mostly) autotrophic origin of life.
Life (2014) 4 : 1013-1025

Fribourg PF, Chami M, Sorzano COS, Gubellini F, Marabini R, Marco S, Jault JM, Lévy D
3D cryo-­‐electron reconstruction of BmrA, a bacterial multidrug ABC transporter in an inward-­‐facing conformation and in a lipidic environment.
Journal of Molecular Biology 426 (10):2059-­‐2069

Fron E, Sliwa M, Adam V, Michiels J, Rocha S, Dedecker P, Hofkens J, Mizuno H Excited state dynamics of photoconvertible fluorescent protein Kaede revealed by ultrafast spectroscopy.
Photochemical & Photobiological Sciences 13(6) : 867­‐874

Gabel F, Lensink MF, Clanti B, Jacob-­‐Dubuisson F, Villeret V, Ebel C
Probing the conformation of FhaC with small-­‐angle neutron scattering and molecular modeling.
Biophysical Journal 107 (1):185-­‐196

Gaboriaud C, Ling WL, Thielens N, Bally I, Rossi V.
Deciphering the fine details of c1 assembly and activation mechanisms : "mission impossible" ?.
Frontiers in immunology, 5:565 (pp 1-7).

Gebhardt R, Teulon JM, Pellequer JL, Burghammer M, Colletier JP, Riekel C
Virus particle assembly into crystalline domains enabled by the coffee ring effect. Soft Matter 10 : 5458‐5462.

Gil‐Caballero S, Favier A, Brutscher B
HNCA+, HNCO+, and HNCACB+ experiments : improved performance by simultaneous detection of orthogonal coherence transfer pathways.
J Biomol NMR 60(1):1‐9

Granell M, Namura M, Alvira S, Garcia-Doval C, Singh AK, Gutsche I, van Raaij MJ and Kanamaru S
Crystallization of the carboxy-terminal region of the bacteriophage T4 proximal long tail fibre protein gp34.
Acta Crystallogr F Struct Biol Commun. 70(7):970-5.

Gudmundsson M, Kim S, Wu M, Ishida T, Haddad Momeni M, Vaaje-­‐Kolstad G, Lundberg D, Royant A, Ståhlberg J, Eijsink VG, Beckham GT, Sandgren M
Structural and electronic snapshots during the transition from a Cu(II) to Cu(I) metal center of a lytic polysaccharide monooxygenase by X-­ray photo-­reduction.
Journal of Biological Chemistry 289, 18782–18792.

Hassaine G, Deluz C, Grasso L, Wyss R, Tol MB, Hovius R, Graff A, Stahlberg H, Tomizaki T, Desmyter A, Moreau C, Li XD, Poitevin F, Vogel H, Nury H.
X-ray structure of the mouse serotonin 5-HT3 receptor.
Nature. 512 : 276-81

Hennig J, Militti C, Popowitz GM, Wang I, Sonntag M, Geerlof A, Gabel F, Gebauer F and Sattler M
Structural basis for the assembly of the Sxl–Unr translation regulatory complex.
Nature doi : 10.1038/nature13693.

Hosy E, Vivaudou M.
The unusual stoichiometry of ADP activation of the KATP channel.
Front Physiol. 5 : 11. doi : 10.3389/fphys.2014.00011

Hou-Broutin, Y, Genua, M, Garçon, LA, Buhot, A, Calemczuk, R, Bonnaffé, D, Lortat-Jacob H, and Livache T.
Electronic Tongue Generating Continuous Recognition Patterns for Protein Analysis.
J. Vis. Exp. 91 (2014) e51901, doi:10.3791/51901.

Huang J-R, Warner LR, Sanchez C, Gabel F, Madl T, Mackereth CD, Sattler M and Blackledge M
Transient Electrostatic Interactions Dominate the Conformational Equilibrium Sampled by Multidomain Splicing Factor U2AF65 : A Combined NMR and SAXS Study.
J. Am. Chem. Soc. 136, 7068–7076

Jackson CJ, Coppin CW, Carr PD, Aleksandrov A, Wilding M, Sugrue E, Ubels J, Paks M, Newman J, Peat TS, Russell RJ, Field M, Weik M, Oakeshott JG, Scott C
Apoenzyme stabilization results in 300-­‐fold increased soluble production of the Zn2+-­‐dependent dechlorinase TrzN.
Applied and Environmental Microbiology, in press.

Jean NL, Bougault CM, Egan AJ, Vollmer W,Simorre JP
Solution NMR assignment of LpoB, an outer‐membrane anchored Penicillin‐Binding Protein activator from Escherichia coli.
Biomol NMR Assign.DOI : 10.1007/s12104‐014‐9557‐z

Jean NL, Bougault C, Derouaux A, Callens G, Vollmer W, Simorre JP
Backbone and side‐chain 1 H, 13 C, and 15 N NMR assignments of the N‐terminal domain of Escherichia coli LpoA.
Biomol NMR Assign. DOI : 10.1016/j.str.2014 (in press).

Jean NL, Bougault CM, Lodge A, Derouaux A, Callens G, Egan AJF, Ayala I, LewisRJ, Vollmer W, Simorre JP.
Elongated structure of the outer‐membrane activator of peptidoglycan synthesis LpoA : implications for PBP1A‐stimulation.
Structure, 8, 1047-54

Jensen MR and Blackledge M
Testing the validity of ensemble descriptions of intrinsically disordered proteins.
Proc. Natl. Acad. Sci. U. S. A. 111, E1557–1558.

Jensen MR, Zweckstetter M, Huang J-R and Blackledge M
Exploring Free-Energy Landscapes of Intrinsically Disordered Proteins at Atomic Resolution Using NMR Spectroscopy.
Chemical Reviews. (In Press)

Jie-rong Huang J-R, Warner L, Sanchez C, Gabel F, Madl T, Mackereth CD, Sattler M and Blackledge M
Mapping the dynamic conformational equilibrium of the multi-domain splicing factor U2AF65 using NMR and SAXS.
J. Am. Chem. Soc. 136(19), 7068-7076.

Jørgensen R, Batot G, Mannerstedt K, Imberty A, Breton C, Hindsgaul O, Royant A, Palcic MM
Structures of a human blood group glycosyltransferase in complex with a photo-­‐activatable UDP-­‐Gal derivative reveal two different binding conformations.
Acta Crystallographica Section F Structural Biology and Crystallization Communications 70, 1015–1021.

Kim H and Gabel F
Uniqueness of quasi-atomic models of bio-macromolecular complexes derived from small-angle scattering data.
Acta Crystallogr D Biol Crystallogr. D [in press]

Kliachyna M, Santoni G, Nussbaum V, Renou J, Sanson B, Colletier JP, Arboleas M, Loiodice M, Weik M, Jean L, Renard PY, Nachon F, Baati R
Design, synthesis and biological evaluation of novel tetrahydroacridine pyridine-­‐ aldoxime and ­‐amidoxime hybrids as efficient uncharged reactivators of nerve agent inhibited human acetylcholinesterase.
European Journal of Medicinal Chemistry 78 : 455-­‐467

Knoll W, Peters J, Kursula P, Gerelli Y, and Natali F.
Influence of myelin proteins on the structure and dynamics of a model membrane with emphasis on the low temperature regime.
Journal of Chemical Physics 141 : 205101.

Knoll W, Peters J, Kursula P, Gerelli Y, Ollivier J, Telling M, Kemner E, and Natali F. Structural and Dynamical Properties of Reconstituted Myelin Sheaths in Presence of Myelin Proteins MBP and P2 Studied by Neutron Scattering.
Soft Matter 10, 519-529.

Krishnan N, Koveal D, Miller D H, Xue B, Akshinthala SD, Kragelj J, Jensen MR, Gauss C-M, Page R, Blackledge M, Muthuswamy SK, Peti W and Tonks NK
Targeting the disordered C terminus of PTP1B with an allosteric inhibitor.
Nat. Chem. Biol. (In Press)

Laffly E, Lacroix M, Martin L, Vassal-Stermann E, Thielens NM, Gaboriaud C
Human ficolin-2 recognition versatility extended : an update on the binding of ficolin-2 to sulfated/phosphated carbohydrates.
FEBS Letters (2014) 588 : 4694-4700

Lebreton A, Job V, Ragon M, Le Monnier A, Dessen A, Cossart P, and Bierne H
Structural basis for the inhibition of the chromatin receptor BAHD1 by the bacterial nucleomodulin LntA.
MBio 5 : e00775-­‐e00713

Liu M, Wang Y, Chem Y, Field MJ, Gao J (2014). QM/MM Through the 1990s : The First Twenty Years of Method
Development and Applications .
Israel J Chem 54, sous presse.

Long D, Bouvignies G and Kay LE.
Measuring Hydrogen Exchange Rates in Invisible Protein Excited States.
Proceedings of the National Academy of Sciences of the USA in press

Ma P, Haller JD, Zajakala J, Macek P, Sivertsen AC, Willbold D, Boisbouvier J, Schanda P
Frontispiece : probing transient conformational States of proteins by solid‐state r1ρ relaxation‐dispersion NMR spectroscopy.
Angew Chem Int Ed Engl.53(17):4312‐7

Maillard AP, Girard E, Ziani W, Petit-Haertlein I, Kahn R and Covès J
The crystal structure of the anti-σ factor CnrY in complex with the σ factor CnrH shows a new structural class of anti-σ factors targeting extracytoplasmic-function σ factors.
Journal of Molecular Biology (2014) 426 : 2313-2327

Maitre M, Weidmann S, Dubois-Brissonnet F, David V, Covès J and Guzzo J
Adaptation of the wine bacterium Oenococcus oeni to ethanol stress : role of the small Heat Shock Protein Lo18 in membrane integrity.
Applied and Environmental Microbiology (2014) 80 : 2973-2980

Malet H, Liu K, El Bakkouri M, Chan SW, Effantin G, Bacia M, Houry WA and Gutsche I
Assembly principles of a unique cage formed by hexameric and decameric E. coli proteins.
Elife. 3:e03653.

Migliorini E, Thakar D, Sadir R, Pleiner T, Baleux B, Lortat-Jacob H, Guerente L and Richter R.P.
Well-defined biomimetic surfaces to characterize glycosaminoglycan-mediated interactions on the molecular, supramolecular and cellular level.
Biomaterials (2014) 35 : 8903-8915.

Morin S, Linnet TE, Lescanne M, Schanda P, Thompson GS, Tollinger M, Teilum K, Gagné S, Marion D, Griesinger C, Blackledge M and d’ Auvergne, E J
relax : the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data.
Bioinformatics. (In Press)

Muñoz-García JC, Carrero P, Canales A, Jiménez-Barbero J, Martín-Lomas M, Imberty A, de Paz JL, Angulo J, Lortat-Jacob H, and Nieto P.M.
Importance of the polarity of the glycosaminoglycan chain on the interaction with FGF-1.
Glycobiology (2014) 24 : 1004-1009.

Niescierowicz K, Caro L, Cherezov V, Vivaudou M, Moreau CJ.
Functional assay for T4 lysozyme-engineered G protein-coupled receptors with an ion channel reporter.
Structure 22 : 149-55

Nicolet Y and Fontecilla-­Camps JC
Fe–S Clusters : Biogenesis and Redox, Catalytic, and Regulatory Properties. In :
Bioinspired Catalysis (2014) Edited by W. Weigand and P. Schollhammer, Wiley‐VCH Verlag GmbH & Co. KGaA, Weinheim, Germany, pp 21-48.

Nicolet Y and Fontecilla-­Camps JC
Iron-­sulfur clusters and molecular oxygen. In :
Iron-­Sulfur Clusters in Chemistry and Biology (2014) Edited by T. A. Rouault, Walter de Gruyter GmbH, Berlin, Germany, pp 239-­265.

Nicolet Y, Zeppieri L, Amara P and Fontecilla-Camps JC
Crystal Structure of Tryptophan Lyase (NosL) : Evidence for Radical Formation at the Amino Group of Tryptophan.
Angewandte Chemie International Edition (2014) 53(44) : 11840-11844.

Nikolaidis I, Favini-Stabile S, Dessen A.
Resistance to antibiotics targeted to the bacterial cell wall.
Protein Science, Wiley-Blackwell, 23 (3), pp.243-59

Nogly P, Gushchin I, Remeeva A, Esteves AN, Borges N, Ma P, Ishchenko A, Grudinin S, Round E, Moraes I, Borshchevskiy V, Santos H, Gordeliy V and Archer M. 
Structure and function of a membrane enzyme from the CDP-¬alcohol phosphatidyltransferase family.
Nature Communication 5 : 4169

Oksanen E, Blakeley MP, El-Hajji M, Ryde U, Budayova-Spano M
The Neutron Structure of Urate Oxidase Resolves a Long-Standing Mechanistic Conundrum and Reveals Unexpected Changes in Protonation
PloS One (2014) 9 : e86651.

Oueis E, Santoni G, Ronco C, Syzgantseva O, Tognetti V, Joubert L, Romieu A, Weik M, Jean L, Sabot C, Nachon F, Renard PY
Reaction site-­‐driven regioselective synthesis of AChE inhibitors.
Organic & Biomolecular Chemistry 12 : 156­‐161

Ozenne V, Noel JK, Heidarsson PO, Brander S, Poulsen FM, Jensen MR, Kragelund BB, Blackledge M and Danielsson, J.
Exploring the minimally frustrated energy landscape of unfolded ACBP.
J. Mol. Biol. 426, 722–734.

Pagnier A, Nicolet Y and Fontecilla-Camps JC
IscS from Archaeoglobus fulgidus has no desulfurase activity but may provide a cysteine
ligand for [Fe2S2] cluster assembly..
BBA Molec. Cell Res. (2014) doi:10.1016/j.bbamcr.2014.10.015

Parigi G, Rezaei-Ghaleh N, Giachetti A, Becker S, Fernandez C, Blackledge M, Griesinger C, Zweckstetter M, Luchinat C.
Long-range correlated dynamics in intrinsically disordered proteins.
J Am Chem Soc. ;136(46):16201-9.

Peters J, Martinez N, Michoud G, Cario A, Franzetti B, Jebbar M, Oger P.
Deep sea microbes probed by incoherent neutron scattering under high hydrostatic pressure.
Z. Phys. Chem. 228 : 1121-1133.

Philippe J, Gallet B, Morlot C, Denapaite D, Hakenbeck R, Chen Y, Vernet T, Zapun A
Mechanism of β-Lactam Action in Streptococcus pneumoniae : the Piperacillin Paradox.
Antimicrobial Agents and Chemotherapy, American Society for Microbiology, pp.AAC.04283-14

Philippe J, Vernet T, Zapun A.
The elongation of ovococci.
Microb Drug Resist. 20(3):215-­‐221. [Book chapter]

Piai A, Hosek T, Gonnelli L, Zawadzka-Kazimierczuk A, Koźmiński W, Brutscher B, Bermel W, Pierattelli R, Felli IC
"CON-CON” assignment strategy for highly flexible intrinsically disordered proteins
J. Biomol. NMR, 60, 209-218.

Picciocchi A, Siaučiūnaiteė-Gaubard L, Petit-Hartlein I, Sadir R, Revilloud J, Caro L, Vivaudou M, Fieschi F, Moreau C, Vivès C.
C-Terminal Engineering of CXCL12 and CCL5 Chemokines : Functional Characterization by Electrophysiological Recordings.
PLoS One (2014) 9 (1) : e87394.

Polovinkin V, Balandin T, Volkov O, Round E, Borshchevskiy V, Utrobin P, von Stetten D, Royant A, Willbold D, Arzumanyan G, Chupin V, Popot JL and Gordeliy V Nanoparticle Surface-­‐Enhanced Raman Scattering of Bacteriorhodopsin Stabilized by Amphipol A8­‐35.
J Membr. Biol., 247(9-10):971-80

Polovinkin V, Gushchin I, Sintsov M, Round E, Balandin T, Chervakov P, Schevchenko V, Utrobin P, Popov A, Borshchevskiy V, Mishin A, Kuklin A, Willbold D, Chupin V, Popot JL, Gordeliy V
High-¬Resolution Structure of a Membrane Protein Transferred from Amphipol to a Lipidic Mesophase.
J Membrane Biol 247(9-10):997-1004.

Rasheed M, Richter C, Chisty LT, Kirkpatrick J, Blackledge M, Webb MR and Driscoll PC.
Ligand-dependent dynamics of the active-site lid in bacterial dimethylarginine dimethylaminohydrolase.
Biochemistry 53, 1092–1104.

Reiser J-B, Legoux F, Gras S, Trudel E, Chouquet A, Léger A, Le Gorrec M, Machillot P, Bonneville M, Saulquin X and Housset D
Analysis of relationships between peptide/MHC structural features and naïve T cell frequency in humans.
J. Immunol. 193 : 5816-5826.

Rennella E, Solyom Z, Brutscher B.
Measuring hydrogen exchange in proteins by selective water saturation in 1H‐ 15N SOFAST/BEST‐type experiments : advantages and limitations. .
J Biomol NMR. 10.1007/s10858‐014‐9857‐8 ( In press)

Rossi V, Bally I, Lacroix M, Arlaud GJ and Thielens NM
Classical complement pathway components c1r and c1s : purification from human serum and in recombinant form and functional characterization.
Methods Mol Biol 1100, 43-­60

Sapay N, Estrada-Mondragon A, Moreau C, Vivaudou M, Crouzy S.
Rebuilding a macromolecular membrane complex at the atomic scale : Case of the Kir6.2 potassium channel coupled to the muscarinic acetylcholine receptor M2.
Proteins. 82 : 1694-707

Sarre A, Ökvist M, Klar T, Moe E and Timmins J
Expression, purification and crystallization of two endonuclease III enzymes from Deinococcus radiodurans
Acta Cryst. F70, 1688–1692

Sawaya MR, Cascio D, Gingery M, Rodriguez J, Goldschmidt L, Colletier JP, Messerschmidt M, Boutet S, Kogli JE, Williams GJ, Brewster AS, Nass K, Hattne J, Botha S, Doak RB, Shoeman RL, DePonte DP, Park HW, Federici BA, Sauter NK, Schlichting I and Eisenberg D.
Proceedings of the National Academy of Sciences, USA, in press.

Schanda P, Triboulet S, Laguri C, Bougault CM, Ayala I, Callon M, Arthur M, Simorre JP.
Atomic model of a cell-wall cross-linking enzyme in complex with an intact bacterial
J Am Chem Soc. ;136(51):17852-60

Schild F, Kieffer-Jaquinod S, Palencia A, Cobessi D, Sarret G, Zubieta C, Jourdain A, Dumas R, Forge V, Testemale D, Bourguignon J, Hugouvieux V.
Biochemical and biophysical characterization of the Selenium binding and reducing site in Arabidopsis thaliana homologue to mammals Selenium Binding Protein 1.
JBC 289(46) : 31765-3176.

Schulte T, Lofling J, Mikaelsson C, Kikhney A, Hentrich K, Diamante A, Ebel C, Normark S, Svergun D, Henriques-­‐ Normark B, Achour A
The basic keratin 10-­‐binding domain of the virulence-­‐associated pneumococcal serine-­‐ rich protein PsrP adopts a novel MSCRAMM fold.
Open Biology 4 (1):130090

Schwalbe M, Ozenne V, Bibow S, Jaremko M, Jaremko L, Gajda M, Jensen MR, Biernat J, Becker S, Mandelkow E, Zweckstetter M and Blackledge M. 
Predictive atomic resolution descriptions of intrinsically disordered hTau40 and α-synuclein in solution from NMR and small angle scattering.
Structure 22, 238–249.

Shaik MM, Bhattacharjee N, Bhattacharjee A, Field MJ, Zanotti G Characterization of the divalent metal binding site of bacterial polysaccharide deacetylase using crystallography and quantum chemical calculations.
Proteins : Structure, Function and Bioinformatics, sous presse.

Shaik MM, Maccagni A, Tourcier G, Di Guilmi AM, Dessen A.
Structural basis of pilus anchoring by the ancillary pilin RrgC of Streptococcus pneumoniae.
J Biol Chem. 289(24):16988-97.

Shandilya J, Senapati P, Hans F, Menoni H, Bouvet P, Dimitrov S, Angelov D, Kundu TK.
Centromeric histone variant CENP-A represses acetylation dependent chromatin transcription that is relieved by histone chaperone NPM1.
J Biochem 156(4):221-7.

Schevchenko V, Gushchin I, Polovinkin V, Round E, Borshchevskiy V, Utrobin P, Popov A, Balandin T, Büldt G, Gordeliy V
Crystal Structure of Escherichia coli-Expressed Haloarcula marismortui Bacteriorhodopsin I in the Trimeric Form
PLoS One 9(12) : e112873.

Sosoniuk E, Vallejos G, Kenawy H, Gaboriaud C, Thielens N, Fujita T, Schwaeble W, Ferreira A and Valck C
Trypanosomacruzi calreticulin inhibits the complement lectin pathway activation by direct interaction with L-­‐Ficolin.
Molecular Immunology 60, 80-­‐85.

Stelter M, Molina R, Jeudy S, Kahn R, Abergel C, Hermoso JA.
A complement to the modern crystallographer’s toolbox : caged gadolinium complexes with versatile binding modes.
Acta Crystallogr D Biol Crystallogr 70:1506- 16.

Sterckx YGJ, Volkov AN, Vranken WF, Kragelj J, Jensen MR, Buts L, Garcia-Pino A, Jové T, Van Melderen L, Blackledge M, van Nuland NAJ and Loris R
Small-Angle X-Ray Scattering- and Nuclear Magnetic Resonance-Derived Conformational Ensemble of the Highly Flexible Antitoxin PaaA2.
Structure (In Press)

Sumarheni S, Hong SS, Josserand V, Coll JL, Boulanger P, Schoehn G and Fender P
Human Full-Length Coagulation Factor X and a GLA Domain-Derived 40-mer Polypeptide Bind to Different Regions of the Adenovirus Serotype 5 Hexon Capsomer.
Hum Gene Ther. 25(4):339-49.

Sukackaite R, Jensen MR, Mas PJ, Blackledge M, Buonomo SB and Hart DJ.
Structural and Biophysical Characterization of Murine Rif1 C Terminus Reveals High Specificity for DNA Cruciform Structures.
J. Biol. Chem. (In Press)

Sutkeviciute I, Thépaut M, Sattin S, Berzi A, McGeagh J, Grudinin S, Weiser J, Le Roy A, Reina JJ, Rojo J, Clerici M, Bernardi A, Ebel C, Fieschi F
Unique DC-­‐SIGN clustering activity of a small glycomimetic : a lesson for ligand design.
ACS Chemical Biology 9 (6):1377-­‐1385

Talon R, Coquelle N, Madern D, and Girard E
An experimental point of view on hydration/solvation in halophilic proteins.
Front. Microbiol. 5(66).

Thakar D, Migliorini E, Coche-Guerente L, Sadir R, Lortat-Jacob H, Boturyn D, Renaudet O, Labbe P, and Richter R.P.
Stable and Terminally Functionalized Glycosaminoglycan Conjugates.
Chem. Comm. (2014) 50 : 15148-15151.

Tomašić T, Hajšek D, Švajger U, Luzar J, Obermajer N, Petit-­‐Haertlein I, Fieschi F, Anderluh M
Monovalent mannose-­‐based DC-­‐SIGN antagonists : targeting the hydrophobic groove of the receptor.
European Journal of Medicinal Chemistry 75:308­‐26

Tosi T, Estrozi LF, Job V, Guilvout I, Pugsley AP, Schoehn G and Dessen A
Structural Similarity of Secretins from Type II and Type III Secretion Systems. Structure 22(9):1348-55.

Trapp M, Tehei M, Trovaslet M, Nachon F, Martinez N, Koza MM, Weik M, Masson P and Peters J
Correlation of the Dynamics of Native Human Acetylcholinesterase and its inhibited Huperzine A counterpart from sub-picoseconds to nanoseconds.
Journal of the Royal Society Interface 11, 20140372.

Trépreau J, Grosse C, Mouesca JM, Sarret G, Girard E, Petit-Haertlein I, Kuennemann S, Desbourdes C, de Rosny E, Maillard AP, Nies DH and Covès J
Metal sensing and signal transduction by CnrX from Cupriavidus metallidurans CH34 : role of the only methionine assessed by a functional, spectroscopic, and theoretical study.
Metallomics 6 : 263-273

Varadi M, Kosol S, Lebrun P, Valentini E, Blackledge M, Dunker AK, Felli IC, Forman-Kay JD, Kriwacki RW, Pierattelli R, Sussman J, Svergun DI, Uversky VN, Vendruscolo M, Wishart D, Wright PE and Tompa P
pE-DB : a database of structural ensembles of intrinsically disordered and of unfolded proteins.
Nucleic Acids Res. 42, D326–335.

Varga N, Sutkeviciute I, Ribeiro-­‐Viana R, Berzi A, Ramdasi R, Daghetti A, Vettoretti G, Amara A, Clerici M, Rojo J, Fieschi F, Bernardi A
A multivalent inhibitor of the DC-­‐SIGN dependent uptake of HIV­‐1 and Dengue virus. Biomaterials 35(13):4175­‐84

Vassal-Stermann E, Lacroix M, Gout E, Laffly E, Pedersen CM, Martin L, Amoroso A, Schmidt RR, Zähringer U, Gaboriaud C, Di Guilmi AM, Thielens NM
Human L-Ficolin recognizes phosphocoline moieities of pneumococcal teichoic acid.
Journal of Immunology (2014) 193:5699-5708

Vauclare P, Madern D, Girard E, Gabel F, Zaccai G and Franzetti B
New insights into microbial adaptation to extreme saline environments.
BIO Web of Conferences 2 02001.

Verneret M, Tacnet-­‐Delorme P, Osman R, Awad R, Grichine A, Kleman JP, Frachet P
Relative Contribution of C1q and Apoptotic Cell-­‐Surface Calreticulin to Macrophage Phagocytosis.
Journal of Innate Immunity Doi : 10.1159/00035883

Vivès RR, Seffouh A and Lortat-Jacob H
Post-synthetic regulation of Heparan Sulfate structure : the yin and yang of the Sulfs in Cancer.
Frontiers in Oncology (2014) 3 : 331. doi : 10.3389/fonc.2013.00331

Volbeda A
X-ray crystallographic studies of metalloproteins.
Methods in Molecular Biology (2014) 1122:189-206

Volbeda A and Fontecilla-­Camps JC
Structural foundations for O2 sensitivity and O2 tolerance in [NiFe]-­hydrogenases. In :
Microbial Bioenergy : Hydrogen Production (2014) Edited by D Zannoni & R de Phillipis, Springer, pp 23-41.

von Stetten D, Giraud T, Carpentier P, Sever F, Terrien M, Dobias F, Juers DH, Flot
D, Mueller-­‐Dieckmann C, Leonard GA, de Sanctis D, Royant A

In crystallo optical spectroscopy (icOS) as a complementary tool on the macromolecular crystallography beamlines of the ESRF.
Acta Crystallographica Section D : Biological Crystallography, in press

Wickstrand C, Dods R, Royant A, Neutze R
Bacteriorhodopsin : would the real structural intermediates please stand up ? Biochimica et Biophysica Acta – General Subjects, in press

Wong, SG and Dessen, A
Structure of a bacterial a2‐macroglobulin reveals mimicry of eukaryotic innate immunity.
Nature Comm. 5, 4917

Wymore T, Field MJ, Langan P, Smith JC, Parks JM (2014). Hydrolysis of DFP and the Nerve Agent (S)-‐Sarin by DFPase
Proceeds along Two Different Reaction Pathways : Implications for Engineering Bioscavengers.
J Phys Chem B 118 : 4479–4489

Yu D, Gustafson WC, Han C, Lafaye C, Noirclerc-­‐Savoye M, Ge WP, Thayer DA, Huang H, Kornberg TB, Royant A, Jan LY, Jan YN, Weiss WA, Shu X
An improved monomeric infrared fluorescent protein for neuronal and tumour brain imaging.
Nature Communications 5:3626

Ziani W, Maillard AP, Petit-Härtlein I, Garnier N, Crouzy S, Girard E, Covès J
The X-ray Structure of NccX from Cupriavidus metallidurans 31A Illustrates Potential Dangers of Detergent Solubilization When Generating and Interpreting Crystal Structures of Membrane Proteins.
J Biol Chem (2014) 289(45):31160-31172.

Zivanovic Y, Confalonieri F, Ponchon L, Lurz R, Chami M, Flayhan A, Renouard M, Huet A, Decottignies P, Davidson AR, Breyton C, Boulanger P
Insights into bacteriophage T5 structure from analysis of its morphogenesis genes and protein components.
Journal of Virology 88(2):1162­‐1174