Publications 2006-2015 (LIRM / Marcoule)

 Anicai L, Stoica C, Vladut C, Negru A, Teulon J-M, Odorico M, Pellequer J-L, Parot P and Enachescu M (2015) Synthesis and characterization of a novel screen-printed modified gold electrode with applications in uranyl ions detection. Rev. Chim. 66: 1639-1644.

 Pisani C, Gaillard J-C, Nouvel V, Odorico M, Armengaud J and Prat O (2015) High-throughput, quantitative assessment of the effects of low-dose silica nanoparticles on lung cells: grasping complex toxicity with a great depth of field. BMC Genomics 16: 315.

 Chaves RC, Dahmane S, Odorico M, Nicolaes GAF and Pellequer J-L (2014) Factor Va alternative conformation reconstruction using Atomic Force Microscopy. Thromb. Haemost. 112: 1167-1173. [HAL]

 Darrouzet E, Lindenthal S, Marcellin D, Pellequer J-L and Pourcher T (2014) The sodium/iodide symporter: state of the art of its molecular characterization. Biochim. Biophys. Acta 1838: 244-253.

 Gaillard J, Venault L, Calvet R, Del Confetto S, Clavier N, Podor R, Odorico M, Pellequer J-L, Vigier N and Moisy P (2014) Effect of hydration and thermal treatment on ceria surface using non-intrusive techniques. J. Nucl. Mater. 444: 359–367. [HAL]

 Gebhardt R, Teulon J-M, Pellequer J-L, Burghammer M, Colletier J-P and Riekel C (2014) Virus particle assembly into crystalline domains enabled by the coffee ring effect. Soft Matter 10: 5458-5462. [HAL]

 Meillan M, Ramin M, Buffeteau T, Marsaudon S, Odorico M, Chen S-wW, Pellequer J-L, Degueil M, Heuze K, Vellutini L and Bennetau B (2014) Self-Assembled Monolayer for AFM Measurements of Tobacco Mosaic Virus (TMV) at the Atomic Level. RCS Adv. 4: 11927-11930. [HAL]

 Mourey G, Tachon G, Pellequer J-L, Zawadzki C, Trossaërt M, Bertrand M-A, Schved J-F and Giansily-Blaizot M (2014) A new Haut-Doubs FVII variant depending on species derived-thromboplastin reagent (F7:p.Arg337His). Haemophilia 20: e336-e358. [HAL]

 Alonso B, Beraud C, Meguellati S, Chen S-wW, Pellequer J-L, Armengaud J and Godon C (2013) Eukaryotic GPN-loop GTPases paralogs use a dimeric assembly reminiscent of archeal GPN. Cell Cycle 12: 463-472.

 Bahassou-Benamri R, Davin A-H, Gaillard J-C, Alonso B, Odorico M, Pible O, Armengaud J and Godon C (2013) Subcellular localization and interaction network of the mRNA decay activator Pat1 upon UV stress. Yeast 30: 353-363.

 Borhany M, Boijout H, Pellequer J-L, Shamsi T, Moulis G, Aguilar-Martinez P, Schved JF and Giansily-Blaizot M (2013) Genotype and phenotype relationships in ten Pakistani unrelated patients with inherited FVII deficiency. Haemophilia 19: 893-897. [HAL]

 Chaves RC and Pellequer J-L (2013) DockAFM: benchmarking protein structures by docking under AFM topographs. Bioinformatics 29: 3230-3231. [HAL]

 Chaves RC, Teulon J-M, Odorico M, Parot P, Chen S-wW and Pellequer J-L (2013) Conformational dynamics of individual antibodies using computational docking and AFM. J. Mol. Recognit. 26: 596-604.

 Chen S-wW, Odorico M, Meillan M, Vellutini L, Teulon J-M, Parot P, Bennetau B and Pellequer J-L (2013) Nanoscale structural features determined by AFM for single virus particles. Nanoscale 5: 10877-10886. [HAL]

 Chen S-wW and Pellequer J-L (2013) Adepth: new representation and its implications for atomic depths of macromolecules. Nucleic Acid. Res. 41: W412-W416.

 Makky A, Viel P, Berthelot T, Chen S-wW, Pellequer J-L and Polesel-Maris J (2013) Piezoelectric tuning fork probe for AFM imaging and specific recognition force spectroscopy of an enzyme and its ligand. J. Mol. Recognit. 26: 521-531. [HAL]

 Thullier P, Avril A, Mathieu J, Behrens CK, Pellequer J-L and Pelat T (2013) Mapping the epitopes of a neutralizing antibody fragment directed against the lethal factor of bacillus anthracis and cross-reacting with the homologous edema factor. PLoS ONE 8: e65855.

 Ciofani G, Danti S, Genchi GG, D’Alessandro D, Pellequer J-L, Odorico M, Mattoli V and Giorgi M (2012) Pilot in vivo toxicological investigation of boron nitride nanotubes. Int. J. Nanomed. 7: 19-24.

 Plantier J-L, Saboulard D, Heinrich L, Pellequer J-L, Négrier C and Delcourt M (2012) Functional mapping of the A2 domain from human factor VIII. Thromb. Haemost. 107: 315-327. [HAL]

 Trinh M-H, Odorico M, Pique ME, Teulon J-M, Roberts VA, Ten Eyck LF, Getzoff ED, Parot P, Chen S-wW and Pellequer J-L (2012) Computational reconstruction of multidomain proteins using atomic force microscopy data. Structure 20: 113-120. [HAL]

 Chen S-wW and Pellequer J-L (2011) DeStripe: frequency-based algorithm for removing stripe noises from AFM images. BMC Struct. Biol. 11: 7.

 Lin C, Chinnappan R, Acharya K, Pellequer J-L and Jankowiak R (2011) On stabilization of a neutral aromatic ligand by π-cation interactions in monoclonal antibodies. Biophys. Chem. 154: 35-40. [HAL]

 Pellequer J-L, Chen S-wW, Saboulard D, Delcourt M, Négrier C and Plantier J-L (2011) Functional mapping of factor VIII C2 domain. Thromb. Haemost. 106: 121-131. [HAL]

 Teulon J-M, Delcuze Y, Odorico M, Chen S-wW, Parot P and Pellequer J-L (2011) Single and multiple bonds in (strept)avidin-biotin interactions. J. Mol. Recognit. 24: 490-502.

 Trinh M-H, Odorico M, Bellanger L, Jacquemond M, Parot P and Pellequer J-L (2011) Tobacco mosaic virus as an AFM tip calibrator. J. Mol. Recognit. 24: 503-510.

 Pible O, Vidaud C, Plantevin S, Pellequer J-L and Quemeneur E (2010) Predicting the disruption by UO(2) (2+) of a protein-ligand interaction. Protein Sci. 19: 2219-2230.

 Chen S-wW, Van Regenmortel MH and Pellequer J-L (2009) Structure-activity relationships in peptide-antibody complexes: implications for epitope prediction and development of synthetic peptide vaccines. Curr. Med. Chem. 16: 953-964. [HAL]

 Dedieu A, Berenguer F, Basset C, Prat O, Quemeneur E, Pible O and Vidaud C (2009) Identification of uranyl binding proteins from human kidney-2 cell extracts by immobilized uranyl affinity chromatography and mass spectrometry. J. Chromatogr. A 1216: 5365-5376.

 Teulon JM, Parot P, Odorico M and Pellequer J-L (2008) Deciphering the energy landscape of the interaction uranyl-DCP with antibodies using dynamic force spectroscopy. Biophys. J. 95: L63-L65. [HAL]

 Gale AJ, Yegneswaran S, Xu X, Pellequer J-L and Griffin JH (2007) Characterization of a factor Xa binding site on factor Va near the Arg506 APC cleavage site. J. Biol. Chem. 282: 21848–21855.

 Greenbaum JA, Andersen PH, Blythe M, Bui H-H, Cachau RE, Crowe J, Davies M, Kolaskar AS, Lund O, Morrison S, Mumey B, Ofran Y, Pellequer J-L, Pinilla C, Ponomarenko JV, Raghava GPS, van Regenmortel MHV, Roggen EL, Sette A, Schlessinger A, Sollner J, Zand M and Peters B (2007) Towards a consensus on datasets and evaluation metrics for developing B cell epitope prediction tools. J. Mol. Recognit. 20: 75-82.

 Odorico M, Teulon J-M, Bellanger L, Vidaud C, Bessou T, Chen S-wW, Quemeneur E, Parot P and Pellequer J-L (2007) Energy landscape of chelated uranyl - antibody interactions by Dynamic Force Spectroscopy. Biophys. J. 93: 645-654. [HAL]

 Odorico M, Teulon JM, Berthoumieu O, Chen S-wW, Parot P and Pellequer J-L (2007) An integrated methodology for data processing in Dynamic Force Spectroscopy of ligand-receptor binding. Ultramicroscopy 107: 887-894. [HAL]

 Parot P, Dufrene YF, Hinterdorfer P, Le Grimellec C, Navajas D, Pellequer J-L and Scheuring S (2007) Past, present and future of atomic force microscopy in life sciences and medicine. J. Mol. Recognit. 20: 418-431.

 Rossi C, Briand E, Parot P, Odorico M and Chopineau J (2007) Surface response methodology for the study of supported membrane formation. J. Phys. Chem. B 111: 7567-7576. [HAL]

 Teulon J-M, Odorico M, Chen S-wW, Parot P and Pellequer J-L (2007) On molecular recognition of an uranyl chelate by monoclonal antibodies. J. Mol. Recognit. 20: 508-515.

 Tzvetkova-Chevolleau T, Hutin C, Noel LD, Goforth R, Carde JP, Caffarri S, Sinning I, Groves M, Teulon J-M, Hoffman NE, Henry R, Havaux M and Nussaume L (2007) Canonical signal recognition particle components can be bypassed for posttranslational protein targeting in chloroplasts. Plant Cell 19: 1635-1648.

 Vidaud C, Gourion-Arsiquaud S, Rollin-Genetet F, Torne-Celer C, Plantevin S, Pible O, Berthomieu C and Quemeneur E (2007) Structural consequences of binding of UO2(2+) to apotransferrin: can this protein account for entry of uranium into human cells? Biochemistry 46: 2215-2226.

 Gale AJ, Radtke K-P, Cunningham MA, Chamberlain D, Pellequer J-L and Griffin JH (2006) Intrinsic stability and functional properties of disulfide bond-stabilized coagulation factor VIIIa variants. J. Thromb. Haemost. 4: 1315-1322. [HAL]

 Pellequer J-L and Chen S-wW (2006) Multi-template approach to modeling engineered disulfide bonds. Proteins 65: 192-202. [HAL]

 Pible O, Guilbaud P, Pellequer J-L, Vidaud C and Quéméneur E (2006) Structural insights into protein-uranyl interaction: towards an in-silico detection method. Biochimie 88: 1631-1638.